HL_7NSP_108
3D structure
- PDB id
- 7NSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAGCUGGAUAG
- Length
- 11 nucleotides
- Bulged bases
- 7NSP|1|v|U|17, 7NSP|1|v|G|18, 7NSP|1|v|G|19, 7NSP|1|v|A|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NSP_108 not in the Motif Atlas
- Homologous match to HL_6ORD_035
- Geometric discrepancy: 0.3485
- The information below is about HL_6ORD_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07951.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7NSP|1|v|C|13
7NSP|1|v|A|14
7NSP|1|v|G|15
7NSP|1|v|C|16
7NSP|1|v|U|17
7NSP|1|v|G|18
7NSP|1|v|G|19
7NSP|1|v|A|20
7NSP|1|v|U|21
7NSP|1|v|A|22
7NSP|1|v|G|23
Current chains
- Chain v
- A-tRNA (Arg)
Nearby chains
- Chain 8
- Transfer RNA; tRNA
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: