HL_7NSP_113

3D structure

PDB id

7NSP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGUCCGGCC

Length

9 nucleotides

Bulged bases

7NSP|1|a|C|1137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSP_113 not in the Motif Atlas

Geometric match to HL_7MLW_004

Geometric discrepancy: 0.3717

The information below is about HL_7MLW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_83003.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

6

Unit IDs

7NSP|1|a|G|1133
7NSP|1|a|G|1134
7NSP|1|a|U|1135
7NSP|1|a|C|1136
7NSP|1|a|C|1137
7NSP|1|a|G|1138
7NSP|1|a|G|1139
7NSP|1|a|C|1140
7NSP|1|a|C|1141

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S9