HL_7NSQ_083

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSQ_083 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0985

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7NSQ|1|a|A|320
7NSQ|1|a|A|321
7NSQ|1|a|C|322
7NSQ|1|a|U|323
7NSQ|1|a|G|324
7NSQ|1|a|A|325
7NSQ|1|a|G|326
7NSQ|1|a|A|327
7NSQ|1|a|C|328
7NSQ|1|a|A|329
7NSQ|1|a|C|330
7NSQ|1|a|G|331
7NSQ|1|a|G|332
7NSQ|1|a|U|333

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20