HL_7NSQ_093

3D structure

PDB id

7NSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

7NSQ|1|a|U|842, 7NSQ|1|a|G|844, 7NSQ|1|a|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSQ_093 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.387

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7NSQ|1|a|C|840
7NSQ|1|a|C|841
7NSQ|1|a|U|842
7NSQ|1|a|U|843
7NSQ|1|a|G|844
7NSQ|1|a|A|845
7NSQ|1|a|G|846

Current chains

Chain a

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S18