HL_7NWG_005
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGCGGCG
- Length
- 7 nucleotides
- Bulged bases
- 7NWG|1|51|G|134, 7NWG|1|51|G|135
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_005 not in the Motif Atlas
- Geometric match to HL_7A0S_011
- Geometric discrepancy: 0.1673
- The information below is about HL_7A0S_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
7NWG|1|51|C|131
7NWG|1|51|G|132
7NWG|1|51|C|133
7NWG|1|51|G|134
7NWG|1|51|G|135
7NWG|1|51|C|136
7NWG|1|51|G|137
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 81
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain N3
- Ribosomal protein L15
- Chain h3
- uL29
- Chain j3
- Ribosomal protein L37
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