HL_7NWG_018
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUACGAAAG
- Length
- 9 nucleotides
- Bulged bases
- 7NWG|1|51|A|1371
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_018 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3453
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13963.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
7NWG|1|51|C|1363
7NWG|1|51|U|1364
7NWG|1|51|A|1368
7NWG|1|51|C|1369
7NWG|1|51|G|1370
7NWG|1|51|A|1371
7NWG|1|51|A|1372
7NWG|1|51|A|1373
7NWG|1|51|G|1374
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 81
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C3
- uL4
- Chain L3
- L13
- Chain N3
- Ribosomal protein L15
- Chain Y3
- Ribosomal protein L26
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