HL_7NWG_021

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCGAGGCCUUCCAGUCCGCCGAGG

Length

24 nucleotides

Bulged bases

7NWG|1|51|C|1437, 7NWG|1|51|U|1438

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|1430
7NWG|1|51|C|1431
7NWG|1|51|G|1432
7NWG|1|51|A|1433
7NWG|1|51|G|1434
7NWG|1|51|G|1435
7NWG|1|51|C|1436
7NWG|1|51|C|1437
7NWG|1|51|U|1438
7NWG|1|51|U|1440
7NWG|1|51|C|1441
7NWG|1|51|C|1442
7NWG|1|51|A|1443
7NWG|1|51|G|1444
7NWG|1|51|U|1445
7NWG|1|51|C|1446
7NWG|1|51|C|1447
7NWG|1|51|G|1448
7NWG|1|51|C|1449
7NWG|1|51|C|1450
7NWG|1|51|G|1451
7NWG|1|51|A|1452
7NWG|1|51|G|1453
7NWG|1|51|G|1454

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain C3

uL4

Chain F3

uL30

Chain Q3

L18

Chain b3

eL29