HL_7NWG_028

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGCUGGUGUGG

Length

11 nucleotides

Bulged bases

7NWG|1|51|G|1815, 7NWG|1|51|G|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|1814
7NWG|1|51|G|1815
7NWG|1|51|C|1816
7NWG|1|51|U|1817
7NWG|1|51|G|1818
7NWG|1|51|G|1819
7NWG|1|51|U|1820
7NWG|1|51|G|1821
7NWG|1|51|U|1822
7NWG|1|51|G|1823
7NWG|1|51|G|1824

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain D3

60S ribosomal protein L5

Chain T3

eL21

Chain b3

eL29