HL_7NWG_031

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCAUGGAAGUCGG

Length

13 nucleotides

Bulged bases

7NWG|1|51|A|1984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|1977
7NWG|1|51|C|1978
7NWG|1|51|A|1979
7NWG|1|51|U|1980
7NWG|1|51|G|1981
7NWG|1|51|G|1982
7NWG|1|51|A|1983
7NWG|1|51|A|1984
7NWG|1|51|G|1985
7NWG|1|51|U|1986
7NWG|1|51|C|1987
7NWG|1|51|G|1988
7NWG|1|51|G|1989

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain u3

uL12