HL_7NWG_053

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

7NWG|1|51|C|3761

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|3757
7NWG|1|51|U|3758
7NWG|1|51|A|3759
7NWG|1|51|A|3760
7NWG|1|51|C|3761
7NWG|1|51|U|3762
7NWG|1|51|A|3763
7NWG|1|51|U|3764
7NWG|1|51|G|3765
7NWG|1|51|A|3766
7NWG|1|51|C|3767

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain A2

Small subunit ribosomal RNA; SSU rRNA

Chain q3

Transfer RNA; tRNA