HL_7NWG_056

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAGCCGGGC

Length

9 nucleotides

Bulged bases

7NWG|1|51|C|4100

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|4097
7NWG|1|51|A|4098
7NWG|1|51|G|4099
7NWG|1|51|C|4100
7NWG|1|51|C|4101
7NWG|1|51|G|4107
7NWG|1|51|G|4108
7NWG|1|51|G|4109
7NWG|1|51|C|4110

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain C2

40S ribosomal protein S3a

Chain g3

60S ribosomal protein L34