HL_7NWG_065

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCGUUCAUAGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|4416
7NWG|1|51|C|4417
7NWG|1|51|G|4418
7NWG|1|51|U|4419
7NWG|1|51|U|4420
7NWG|1|51|C|4421
7NWG|1|51|A|4422
7NWG|1|51|U|4423
7NWG|1|51|A|4424
7NWG|1|51|G|4425
7NWG|1|51|C|4426

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain I3

60S ribosomal protein L10

Chain m3

60S RIBOSOMAL PROTEIN EL40