HL_7NWG_069
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_069 not in the Motif Atlas
- Homologous match to HL_5TBW_065
- Geometric discrepancy: 0.1947
- The information below is about HL_5TBW_065
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7NWG|1|51|C|4603
7NWG|1|51|G|4604
7NWG|1|51|A|4605
7NWG|1|51|G|4606
7NWG|1|51|A|4607
7NWG|1|51|G|4608
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain H3
- L9
- Chain m3
- 60S RIBOSOMAL PROTEIN EL40
Coloring options: