HL_7NWG_071

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GACUGAACGCCUCUAAGUC

Length

19 nucleotides

Bulged bases

7NWG|1|51|G|4694

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|4686
7NWG|1|51|A|4687
7NWG|1|51|C|4688
7NWG|1|51|U|4689
7NWG|1|51|G|4690
7NWG|1|51|A|4691
7NWG|1|51|A|4692
7NWG|1|51|C|4693
7NWG|1|51|G|4694
7NWG|1|51|C|4695
7NWG|1|51|C|4696
7NWG|1|51|U|4697
7NWG|1|51|C|4698
7NWG|1|51|U|4699
7NWG|1|51|A|4700
7NWG|1|51|A|4701
7NWG|1|51|G|4702
7NWG|1|51|U|4703
7NWG|1|51|C|4704

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain H3

L9

Chain O3

60S RIBOSOMAL PROTEIN UL13

Chain m3

60S RIBOSOMAL PROTEIN EL40