HL_7NWG_094

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUCCACUUUAAAUCCUUUAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|G|565
7NWG|1|A2|U|566
7NWG|1|A2|C|567
7NWG|1|A2|C|568
7NWG|1|A2|A|569
7NWG|1|A2|C|570
7NWG|1|A2|U|571
7NWG|1|A2|U|572
7NWG|1|A2|U|573
7NWG|1|A2|A|574
7NWG|1|A2|A|575
7NWG|1|A2|A|576
7NWG|1|A2|U|577
7NWG|1|A2|C|578
7NWG|1|A2|C|579
7NWG|1|A2|U|580
7NWG|1|A2|U|581
7NWG|1|A2|U|582
7NWG|1|A2|A|583
7NWG|1|A2|A|584
7NWG|1|A2|C|585

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain K2

40S ribosomal protein S9

Chain Z2

40S ribosomal protein S24