3D structure

PDB id
7NWG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GUGUUCAAAGC
Length
11 nucleotides
Bulged bases
7NWG|1|A2|G|821
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWG|1|A2|G|819
7NWG|1|A2|U|820
7NWG|1|A2|G|821
7NWG|1|A2|U|822
7NWG|1|A2|U|823
7NWG|1|A2|C|824
7NWG|1|A2|A|825
7NWG|1|A2|A|826
7NWG|1|A2|A|827
7NWG|1|A2|G|828
7NWG|1|A2|C|829

Current chains

Chain A2
18S Ribosomal RNA

Nearby chains

Chain F2
S4
Chain K2
40S ribosomal protein S9
Chain Z2
40S ribosomal protein S24

Coloring options:

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