HL_7NWG_117
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCUAACACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_117 not in the Motif Atlas
- Homologous match to HL_4YCP_002
- Geometric discrepancy: 0.2918
- The information below is about HL_4YCP_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|q3|C|31
7NWG|1|q3|C|32
7NWG|1|q3|U|33
7NWG|1|q3|A|34
7NWG|1|q3|A|35
7NWG|1|q3|C|36
7NWG|1|q3|A|37
7NWG|1|q3|C|38
7NWG|1|q3|G|39
Current chains
- Chain q3
- A/P-Site tRNA
Nearby chains
- Chain 51
- Large subunit ribosomal RNA; LSU rRNA
- Chain A2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Y2
- Ribosomal protein S23
- Chain v3
- mRNA
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