HL_7NWG_124

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCGUCUUGAAACACGG

Length

16 nucleotides

Bulged bases

7NWG|1|51|C|1325

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|1314
7NWG|1|51|C|1315
7NWG|1|51|G|1316
7NWG|1|51|U|1317
7NWG|1|51|C|1318
7NWG|1|51|U|1319
7NWG|1|51|U|1320
7NWG|1|51|G|1321
7NWG|1|51|A|1322
7NWG|1|51|A|1323
7NWG|1|51|A|1324
7NWG|1|51|C|1325
7NWG|1|51|A|1326
7NWG|1|51|C|1327
7NWG|1|51|G|1328
7NWG|1|51|G|1329

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain B3

uL3

Chain C3

uL4

Chain a3

uL15

Chain e3

eL32