HL_7NWG_126

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GACGUGCGAAUC

Length

12 nucleotides

Bulged bases

7NWG|1|51|U|1596, 7NWG|1|51|A|1600, 7NWG|1|51|A|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|1592
7NWG|1|51|A|1593
7NWG|1|51|C|1594
7NWG|1|51|G|1595
7NWG|1|51|U|1596
7NWG|1|51|G|1597
7NWG|1|51|C|1598
7NWG|1|51|G|1599
7NWG|1|51|A|1600
7NWG|1|51|A|1601
7NWG|1|51|U|1602
7NWG|1|51|C|1603

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain 1

Sec61Beta

Chain B3

uL3

Chain P3

uL22

Chain j3

Ribosomal protein L37