HL_7NWG_127

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGGGAUGAACCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|1884
7NWG|1|51|G|1885
7NWG|1|51|G|1886
7NWG|1|51|G|1887
7NWG|1|51|A|1888
7NWG|1|51|U|1889
7NWG|1|51|G|1890
7NWG|1|51|A|1891
7NWG|1|51|A|1892
7NWG|1|51|C|1893
7NWG|1|51|C|1894
7NWG|1|51|G|1895

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain 71

5S ribosomal RNA; 5S rRNA

Chain F3

uL30

Chain e3

eL32

Chain f3

eL33