HL_7NWG_129

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGUUCAGAUCCCC

Length

14 nucleotides

Bulged bases

7NWG|1|51|U|2530, 7NWG|1|51|C|2531

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|2521
7NWG|1|51|G|2522
7NWG|1|51|G|2523
7NWG|1|51|U|2524
7NWG|1|51|U|2525
7NWG|1|51|C|2526
7NWG|1|51|A|2527
7NWG|1|51|G|2528
7NWG|1|51|A|2529
7NWG|1|51|U|2530
7NWG|1|51|C|2531
7NWG|1|51|C|2532
7NWG|1|51|C|2533
7NWG|1|51|C|2534

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain R3

60S ribosomal protein L19

Chain X3

uL23

Chain g3

60S ribosomal protein L34

Chain k3

L38