3D structure

PDB id
7NWG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
CUUUUGGGUUUUAAG
Length
15 nucleotides
Bulged bases
7NWG|1|51|U|4354
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NWG|1|51|C|4350
7NWG|1|51|U|4351
7NWG|1|51|U|4352
7NWG|1|51|U|4353
7NWG|1|51|U|4354
7NWG|1|51|G|4355
7NWG|1|51|G|4356
7NWG|1|51|G|4357
7NWG|1|51|U|4358
7NWG|1|51|U|4359
7NWG|1|51|U|4360
7NWG|1|51|U|4361
7NWG|1|51|A|4362
7NWG|1|51|A|4363
7NWG|1|51|G|4364

Current chains

Chain 51
28S Ribosomal RNA

Nearby chains

Chain L3
L13
Chain Q3
L18
Chain a3
uL15
Chain i3
60S ribosomal protein L36
Chain o3
eL42

Coloring options:

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