Loop HL_7NWG

3D structure

PDB id: 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
Description: Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

Loop

Sequence: GGCUUGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCC
Length: 45 nucleotides
Bulged bases: 7NWG|1|51|U|4437
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7NWG|1|51|G|4400
7NWG|1|51|G|4401
7NWG|1|51|C|4402
7NWG|1|51|U|4403
7NWG|1|51|U|4404
7NWG|1|51|G|4405
7NWG|1|51|U|4406
7NWG|1|51|G|4407
7NWG|1|51|G|4408
7NWG|1|51|C|4409
7NWG|1|51|G|4410
7NWG|1|51|G|4411
7NWG|1|51|C|4412
7NWG|1|51|C|4413
7NWG|1|51|A|4414
7NWG|1|51|A|4415
7NWG|1|51|G|4416
7NWG|1|51|C|4417
7NWG|1|51|G|4418
7NWG|1|51|U|4419
7NWG|1|51|U|4420
7NWG|1|51|C|4421
7NWG|1|51|A|4422
7NWG|1|51|U|4423
7NWG|1|51|A|4424
7NWG|1|51|G|4425
7NWG|1|51|C|4426
7NWG|1|51|G|4427
7NWG|1|51|A|4428
7NWG|1|51|C|4429
7NWG|1|51|G|4430
7NWG|1|51|U|4431
7NWG|1|51|C|4432
7NWG|1|51|G|4433
7NWG|1|51|C|4434
7NWG|1|51|U|4435
7NWG|1|51|U|4436
7NWG|1|51|U|4437
7NWG|1|51|U|4438
7NWG|1|51|U|4439
7NWG|1|51|G|4440
7NWG|1|51|A|4441
7NWG|1|51|U|4442
7NWG|1|51|C|4443
7NWG|1|51|C|4444

Current chains

Chain 51: 28S Ribosomal RNA

Nearby chains

Chain 71: 5S ribosomal RNA; 5S rRNA
Chain B3: uL3
Chain I3: 60S ribosomal protein L10
Chain b3: eL29
Chain m3: 60S RIBOSOMAL PROTEIN EL40
Chain q3: Transfer RNA; tRNA

HL_7NWG_134