HL_7NWG_145
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAGGUGAAAUUC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_145 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.285
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05426.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
7NWG|1|A2|G|956
7NWG|1|A2|A|957
7NWG|1|A2|G|958
7NWG|1|A2|G|959
7NWG|1|A2|U|960
7NWG|1|A2|G|961
7NWG|1|A2|A|962
7NWG|1|A2|A|963
7NWG|1|A2|A|964
7NWG|1|A2|U|965
7NWG|1|A2|U|966
7NWG|1|A2|C|967
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain 51
- Large subunit ribosomal RNA; LSU rRNA
- Chain P2
- uS11
- Chain b2
- 40S ribosomal protein S26
- Chain v3
- mRNA
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