3D structure

PDB id
7NWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
CUGAAAGCAUCUAAG
Length
15 nucleotides
Bulged bases
7NWW|1|1|G|2751, 7NWW|1|1|C|2755
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7NWW_066 not in the Motif Atlas
Homologous match to HL_5J7L_199
Geometric discrepancy: 0.0799
The information below is about HL_5J7L_199
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_74055.2
Basepair signature
cWW-tWH-cWH-tSH-tHW-tHW-tSW
Number of instances in this motif group
7

Unit IDs

7NWW|1|1|C|2745
7NWW|1|1|U|2746
7NWW|1|1|G|2747
7NWW|1|1|A|2748
7NWW|1|1|A|2749
7NWW|1|1|A|2750
7NWW|1|1|G|2751
7NWW|1|1|C|2752
7NWW|1|1|A|2753
7NWW|1|1|U|2754
7NWW|1|1|C|2755
7NWW|1|1|U|2756
7NWW|1|1|A|2757
7NWW|1|1|A|2758
7NWW|1|1|G|2759

Current chains

Chain 1
23S rRNA

Nearby chains

Chain G
50S ribosomal protein L6
Chain I
50S ribosomal protein L13
Chain e
50S ribosomal protein L36

Coloring options:


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