HL_7O19_013

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O19_013 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1913

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7O19|1|AA|G|521
7O19|1|AA|C|522
7O19|1|AA|A|523
7O19|1|AA|G|524
7O19|1|AA|C|525
7O19|1|AA|C|526
7O19|1|AA|G7M|527
7O19|1|AA|C|528

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AL

30S ribosomal protein S12