HL_7O19_088

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

7O19|1|BA|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O19_088 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.1077

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O19|1|BA|C|2248
7O19|1|BA|U|2249
7O19|1|BA|G|2250
7O19|1|BA|OMG|2251
7O19|1|BA|G|2252
7O19|1|BA|G|2253
7O19|1|BA|C|2254
7O19|1|BA|G|2255
7O19|1|BA|G|2256

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain B8

Transfer RNA; tRNA

Chain BM

50S ribosomal protein L16

Chain BW

50S ribosomal protein L27