HL_7O1A_046
3D structure
- PDB id
- 7O1A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUGACAGCC
- Length
- 9 nucleotides
- Bulged bases
- 7O1A|1|BA|G|329, 7O1A|1|BA|A|330, 7O1A|1|BA|C|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O1A_046 not in the Motif Atlas
- Homologous match to HL_5J7L_144
- Geometric discrepancy: 0.0605
- The information below is about HL_5J7L_144
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.2
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 13
Unit IDs
7O1A|1|BA|G|327
7O1A|1|BA|U|328
7O1A|1|BA|G|329
7O1A|1|BA|A|330
7O1A|1|BA|C|331
7O1A|1|BA|A|332
7O1A|1|BA|G|333
7O1A|1|BA|C|334
7O1A|1|BA|C|335
Current chains
- Chain BA
- Ribosomal RNA 23S
Nearby chains
- Chain BE
- 50S ribosomal protein L4
- Chain BU
- 50S ribosomal protein L24
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