HL_7O1A_094

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

7O1A|1|BA|A|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1A_094 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0755

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7O1A|1|BA|U|2404
7O1A|1|BA|G|2405
7O1A|1|BA|A|2406
7O1A|1|BA|A|2407
7O1A|1|BA|U|2408
7O1A|1|BA|G|2409
7O1A|1|BA|G|2410
7O1A|1|BA|A|2411
7O1A|1|BA|A|2412
7O1A|1|BA|G|2413

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BL

50S ribosomal protein L15