HL_7O1A_099

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1A_099 not in the Motif Atlas

Geometric match to HL_5J7L_197

Geometric discrepancy: 0.0777

The information below is about HL_5J7L_197

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7O1A|1|BA|C|2658
7O1A|1|BA|G|2659
7O1A|1|BA|A|2660
7O1A|1|BA|G|2661
7O1A|1|BA|A|2662
7O1A|1|BA|G|2663

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BG

50S ribosomal protein L6