HL_7O1C_018

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

7O1C|1|AA|U|842, 7O1C|1|AA|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1C_018 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3792

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7O1C|1|AA|C|840
7O1C|1|AA|C|841
7O1C|1|AA|U|842
7O1C|1|AA|U|843
7O1C|1|AA|G|844
7O1C|1|AA|A|845
7O1C|1|AA|G|846

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AR

30S ribosomal protein S18