3D structure

PDB id
7O1C (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.6 Å

Loop

Sequence
CCUUGAG
Length
7 nucleotides
Bulged bases
7O1C|1|AA|U|842, 7O1C|1|AA|A|845
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7O1C_018 not in the Motif Atlas
Geometric match to HL_2Y8W_001
Geometric discrepancy: 0.3792
The information below is about HL_2Y8W_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_81100.2
Basepair signature
cWW
Number of instances in this motif group
3

Unit IDs

7O1C|1|AA|C|840
7O1C|1|AA|C|841
7O1C|1|AA|U|842
7O1C|1|AA|U|843
7O1C|1|AA|G|844
7O1C|1|AA|A|845
7O1C|1|AA|G|846

Current chains

Chain AA
Ribosomal RNA 16S

Nearby chains

Chain AR
30S ribosomal protein S18

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3009 s