HL_7O1C_110

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

(PSU)GCUAACG

Length

8 nucleotides

Bulged bases

7O1C|1|BA|U|958, 7O1C|1|BA|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1C_110 not in the Motif Atlas

Homologous match to HL_5J7L_211

Geometric discrepancy: 0.0983

The information below is about HL_5J7L_211

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7O1C|1|BA|PSU|955
7O1C|1|BA|G|956
7O1C|1|BA|C|957
7O1C|1|BA|U|958
7O1C|1|BA|A|959
7O1C|1|BA|A|960
7O1C|1|BA|C|961
7O1C|1|BA|G|962

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BM

50S ribosomal protein L16