HL_7O1C_115

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUCGGACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1C_115 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.0959

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7O1C|1|BA|G|2304
7O1C|1|BA|U|2305
7O1C|1|BA|C|2306
7O1C|1|BA|G|2307
7O1C|1|BA|G|2308
7O1C|1|BA|A|2309
7O1C|1|BA|C|2310
7O1C|1|BA|A|2311
7O1C|1|BA|U|2312

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BF

50S ribosomal protein L5