HL_7O5B_047

3D structure

PDB id

7O5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

7O5B|1|X|U|285

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O5B_047 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3657

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7O5B|1|X|G|283
7O5B|1|X|C|284
7O5B|1|X|U|285
7O5B|1|X|U|286
7O5B|1|X|G|287
7O5B|1|X|C|288

Current chains

Chain X

23S rRNA (2887-MER)

Nearby chains