HL_7O5B_084
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CGUAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O5B_084 not in the Motif Atlas
- Homologous match to HL_5J7L_179
- Geometric discrepancy: 0.119
- The information below is about HL_5J7L_179
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_04783.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7O5B|1|X|C|1835
7O5B|1|X|G|1836
7O5B|1|X|U|1837
7O5B|1|X|A|1838
7O5B|1|X|A|1839
7O5B|1|X|G|1840
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain Z
- 50S ribosomal protein L2
- Chain v
- 50S ribosomal protein L28
Coloring options: