HL_7O80_018
3D structure
- PDB id
- 7O80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAGGUGAAAU(PSU)C
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O80|1|A2|G|957
7O80|1|A2|A|958
7O80|1|A2|G|959
7O80|1|A2|G|960
7O80|1|A2|U|961
7O80|1|A2|G|962
7O80|1|A2|A|963
7O80|1|A2|A|964
7O80|1|A2|A|965
7O80|1|A2|U|966
7O80|1|A2|PSU|967
7O80|1|A2|C|968
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AE
- Ribosomal protein eS26
- Chain AH
- Coronavirus frameshifting stimulation element
- Chain AI
- E-site tRNA
- Chain Aa
- 40S ribosomal protein S3a
- Chain Ae
- Ribosomal protein S5
- Chain An
- 40S ribosomal protein uS11
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
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