HL_7O80_129
3D structure
- PDB id
- 7O80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCGCACGAAA
- Length
- 10 nucleotides
- Bulged bases
- 7O80|1|B5|C|1309, 7O80|1|B5|G|1310, 7O80|1|B5|C|1311, 7O80|1|B5|A|1315
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O80|1|B5|U|1308
7O80|1|B5|C|1309
7O80|1|B5|G|1310
7O80|1|B5|C|1311
7O80|1|B5|A|1312
7O80|1|B5|C|1313
7O80|1|B5|G|1314
7O80|1|B5|A|1315
7O80|1|B5|A|1316
7O80|1|B5|A|1317
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BC
- 60S ribosomal protein L4
- Chain BL
- Ribosomal protein eL13
- Chain BN
- Ribosomal protein L15
- Chain BY
- Ribosomal protein L26
Coloring options: