HL_7O9K_027

3D structure

PDB id

7O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGGGGCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O9K_027 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1605

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7O9K|1|A|U|2813
7O9K|1|A|G|2814
7O9K|1|A|G|2815
7O9K|1|A|G|2816
7O9K|1|A|G|2817
7O9K|1|A|C|2818
7O9K|1|A|G|2819

Current chains

Chain A

16S rRNA

Nearby chains

Chain A1

5-methylcytosine rRNA methyltransferase NSUN4

Chain G

Mitochondrial ribosome-associated GTPase 2