HL_7O9M_005

3D structure

PDB id

7O9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UCUGCAUA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O9M_005 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.327

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7O9M|1|A|U|1848
7O9M|1|A|C|1849
7O9M|1|A|U|1850
7O9M|1|A|G|1851
7O9M|1|A|C|1852
7O9M|1|A|A|1853
7O9M|1|A|U|1854
7O9M|1|A|A|1855

Current chains

Chain A

16S rRNA

Nearby chains

Chain M

39S ribosomal protein L15, mitochondrial

Chain S

39S ribosomal protein L21, mitochondrial