HL_7O9M_026
3D structure
- PDB id
- 7O9M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UGGGGCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O9M_026 not in the Motif Atlas
- Geometric match to HL_4GXY_003
- Geometric discrepancy: 0.328
- The information below is about HL_4GXY_003
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_97725.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7O9M|1|A|U|2813
7O9M|1|A|G|2814
7O9M|1|A|G|2815
7O9M|1|A|G|2816
7O9M|1|A|G|2817
7O9M|1|A|C|2818
7O9M|1|A|G|2819
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain A1
- 5-methylcytosine rRNA methyltransferase NSUN4
Coloring options: