HL_7O9M_032

3D structure

PDB id

7O9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UU(OMG)UUCA

Length

7 nucleotides

Bulged bases

7O9M|1|A|U|3039, 7O9M|1|A|U|3042, 7O9M|1|A|C|3043

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O9M_032 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2086

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7O9M|1|A|U|3038
7O9M|1|A|U|3039
7O9M|1|A|OMG|3040
7O9M|1|A|U|3041
7O9M|1|A|U|3042
7O9M|1|A|C|3043
7O9M|1|A|A|3044

Current chains

Chain A

16S rRNA

Nearby chains

Chain n

rRNA methyltransferase 2, mitochondrial