HL_7O9M_034

3D structure

PDB id

7O9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU module

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O9M_034 not in the Motif Atlas

Geometric match to HL_5J7L_197

Geometric discrepancy: 0.095

The information below is about HL_5J7L_197

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7O9M|1|A|C|3126
7O9M|1|A|G|3127
7O9M|1|A|A|3128
7O9M|1|A|A|3129
7O9M|1|A|A|3130
7O9M|1|A|G|3131

Current chains

Chain A

16S rRNA

Nearby chains

Chain u

Mitochondrial assembly of ribosomal large subunit protein 1