HL_7OBR_061

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GACAGAAAC

Length

9 nucleotides

Bulged bases

7OBR|1|5|A|4255, 7OBR|1|5|A|4256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OBR_061 not in the Motif Atlas

Homologous match to HL_8C3A_057

Geometric discrepancy: 0.1613

The information below is about HL_8C3A_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72777.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7OBR|1|5|G|4250
7OBR|1|5|A|4251
7OBR|1|5|C|4252
7OBR|1|5|A|4253
7OBR|1|5|G|4254
7OBR|1|5|A|4255
7OBR|1|5|A|4256
7OBR|1|5|A|4257
7OBR|1|5|C|4258

Current chains

Chain 5

28S rRNA

Nearby chains

Chain J

Ribosomal protein L11