HL_7OBR_074

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUAGACGAC

Length

9 nucleotides

Bulged bases

7OBR|1|5|U|4976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OBR_074 not in the Motif Atlas

Homologous match to HL_8C3A_071

Geometric discrepancy: 0.1146

The information below is about HL_8C3A_071

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.4

Basepair signature

cWW-cSW-F-F-F-cWW

Number of instances in this motif group

9

Unit IDs

7OBR|1|5|G|4975
7OBR|1|5|U|4976
7OBR|1|5|A|4977
7OBR|1|5|G|4978
7OBR|1|5|A|4979
7OBR|1|5|C|4980
7OBR|1|5|G|4981
7OBR|1|5|A|4982
7OBR|1|5|C|4983

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain P

uL22