HL_7ODE_037

3D structure

PDB id

7ODE (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome LiCl core particle

Experimental method

ELECTRON MICROSCOPY

Resolution

2.84 Å

Loop

Sequence

CCCGCG

Length

6 nucleotides

Bulged bases

7ODE|1|I|C|1732

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ODE_037 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.358

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

7ODE|1|I|C|1727
7ODE|1|I|C|1728
7ODE|1|I|C|1730
7ODE|1|I|G|1731
7ODE|1|I|C|1732
7ODE|1|I|G|1733

Current chains

Chain I

23S rRNA

Nearby chains