HL_7ODR_038
3D structure
- PDB id
- 7ODR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State A of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAACACAAA
- Length
- 10 nucleotides
- Bulged bases
- 7ODR|1|B|U|1614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ODR_038 not in the Motif Atlas
- Geometric match to HL_5B63_003
- Geometric discrepancy: 0.2637
- The information below is about HL_5B63_003
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20490.1
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 13
Unit IDs
7ODR|1|B|U|1613
7ODR|1|B|U|1614
7ODR|1|B|A|1615
7ODR|1|B|A|1616
7ODR|1|B|C|1617
7ODR|1|B|A|1618
7ODR|1|B|C|1619
7ODR|1|B|A|1620
7ODR|1|B|A|1621
7ODR|1|B|A|1622
Current chains
- Chain B
- mitochondrial tRNAVal
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain j
- 39S ribosomal protein L52, mitochondrial
Coloring options: