HL_7ODR_043
3D structure
- PDB id
- 7ODR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State A of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCGUUCAAGC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ODR_043 not in the Motif Atlas
- Homologous match to HL_5J7L_212
- Geometric discrepancy: 0.2306
- The information below is about HL_5J7L_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7ODR|1|A|G|2201
7ODR|1|A|C|2202
7ODR|1|A|G|2203
7ODR|1|A|U|2204
7ODR|1|A|U|2205
7ODR|1|A|C|2206
7ODR|1|A|A|2207
7ODR|1|A|A|2208
7ODR|1|A|G|2209
7ODR|1|A|C|2210
Current chains
- Chain A
- 16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
Coloring options: