HL_7ODS_021
3D structure
- PDB id
- 7ODS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State B of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUUACCAAAAAC
- Length
- 13 nucleotides
- Bulged bases
- 7ODS|1|A|A|2500, 7ODS|1|A|C|2501, 7ODS|1|A|C|2502, 7ODS|1|A|A|2506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ODS_021 not in the Motif Atlas
- Homologous match to HL_7A0S_045
- Geometric discrepancy: 0.1741
- The information below is about HL_7A0S_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7ODS|1|A|G|2496
7ODS|1|A|U|2497
7ODS|1|A|U|2498
7ODS|1|A|U|2499
7ODS|1|A|A|2500
7ODS|1|A|C|2501
7ODS|1|A|C|2502
7ODS|1|A|A|2503
7ODS|1|A|A|2504
7ODS|1|A|A|2505
7ODS|1|A|A|2506
7ODS|1|A|A|2507
7ODS|1|A|C|2508
Current chains
- Chain A
- 16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
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