HL_7OE0_032

3D structure

PDB id

7OE0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-30S delta rbfA ribosomal subunit class F

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GGGAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OE0_032 not in the Motif Atlas

Geometric match to HL_5VSU_001

Geometric discrepancy: 0.3441

The information below is about HL_5VSU_001

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

7OE0|1|A|G|1515
7OE0|1|A|G|1516
7OE0|1|A|G|1517
7OE0|1|A|A|1518
7OE0|1|A|A|1519
7OE0|1|A|C|1520

Current chains

Chain A

16S rRNA

Nearby chains