HL_7OF2_011
3D structure
- PDB id
- 7OF2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AACCCUCUAAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OF2_011 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.3364
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40612.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
7OF2|1|A|A|2064
7OF2|1|A|A|2065
7OF2|1|A|C|2066
7OF2|1|A|C|2067
7OF2|1|A|C|2068
7OF2|1|A|U|2069
7OF2|1|A|C|2070
7OF2|1|A|U|2071
7OF2|1|A|A|2072
7OF2|1|A|A|2073
7OF2|1|A|A|2074
7OF2|1|A|U|2075
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
- Chain f
- 39S ribosomal protein L48, mitochondrial
Coloring options: